凡纳滨对虾含溴结构域蛋白基因cDNA序列的克隆和表达特征

Isolation and characterization of a bromodomain-containing protein cDNA sequence from Litopenaeus vannamei and its expression analysis

  • 摘要: 含溴结构域蛋白(bromodomain/BRD-containing protein, BCP)是一种高度保守的蛋白,属于含溴结构域和额外终端域(bromodomain and extraterminal, BET)蛋白超家族成员。该蛋白在有丝分裂过程中通过募集不同的染色体修饰蛋白,达到了广泛调控基因复制及转录的作用,其表达水平的变化常与肿瘤及炎症的发生相关联。本研究根据实验室前期转录组结果提示信息,首次获得了凡纳滨对虾2 229 bp的BCP基因cDNA序列(Lv-BRD, GenBank注册号:MH638256),利用在线软件进行了生物信息学分析,利用实时荧光定量 PCR (qPCR)技术分析了该基因的组织表达特征和其在对虾白斑综合征病毒(WSSV)、苏云金芽孢杆菌以及副溶血性弧菌侵染过程中的表达变化特征。结果显示,Lv-BRD编码的蛋白质有一个保守的可以参与细胞周期调控过程的溴结构域(bromodomain, BRD);组织表达分析表明该基因主要在凡纳滨对虾血细胞、肝胰腺和鳃组织中表达;在WSSV和病原菌感染后早期(0.5~12 hours past infection,hpi),Lv-BRD的表达可以被显著诱导,在血细胞中呈明显上调的表达趋势,表明该基因在一定程度上参与了对虾体内由病原引发的天然免疫应答反应。上述研究结果为进一步研究Lv-BRD基因在对虾抗病毒免疫及干扰素调控过程中的功能和作用机制奠定了基础。

     

    Abstract: Bromodomain-containing protein (BCP) is a highly conservative protein, which belongs to the bromodomain and extraterminal (BET) protein superfamily. BCP can regulate gene replication and transcription by recruiting different chromosome modifying proteins, and the change of its expression is often associated with the occurrence of tumor and inflammation. Based on the transcriptomic analysis, a cDNA sequence of BCP gene (Lv-BRD), 2 229 bp in length, was isolated from the hemocytes of Litopenaeus vannamei in this study. The sequence has been deposited in GenBank with accession number of MH638256. Using online tools, the sequence was characterized. The deduced protein sequence of Lv-BRD has a conservative bromine domain, indicating that it may be involved in the regulation of cell cycle. Tissue/organ expression was analyzed by qPCR and the result showed that Lv-BRD was mainly expressed in hemocytes, hepatopancreas and gills of shrimp. Expression of Lv-BRD in hemocytes increased significantly in the early stage (0.5–12 hours past infection, hpi) challenge by white spot syndrome virus (WSSV), B. thuringiensis and V. parahemolyticus, suggesting that Lv-BRD is involved in the innate immune response to pathogens in shrimp. These results provided a basis for further studies on the function and mechanism of Lv-BRD in antiviral immunity and interferon regulation of L. vannamei.

     

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